CDS

Accession Number TCMCG057C46875
gbkey CDS
Protein Id XP_018450864.1
Location complement(join(29250287..29250420,29250527..29252122,29252217..29252732,29252837..29253008,29253088..29253430,29253545..29253669,29253757..29253890,29254401..29254458,29254609..29254761,29254924..29255896,29255976..29256141,29256218..29256357,29256800..29256912,29257014..29257135,29257376..29257522,29257613..29257781,29258218..29258414,29258505..29258694))
Gene LOC108822316
GeneID 108822316
Organism Raphanus sativus

Protein

Length 1815aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018595362.1
Definition PREDICTED: nuclear pore complex protein NUP214 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Nuclear pore complex protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14317        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005048        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008139        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008356        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010070        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033218        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042277        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044613        [VIEW IN EMBL-EBI]
GO:0044615        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAAATTAGAGATTACAGAAGAGGTGGAAGGAGATCGCGTCGGAACCACCGATTACTACTTCGATAGAATCGGCGAACCAATCCGTATCAAGGAAGACGACGCTCAGTACGATCTCGATAGCCCTCCGTCACAGCCTCTCGCTATCTCCGAACGCCGCGGCTTAGTTTTCATCGCACATTCCTCTGGGTTTCTTGTTGGAAGGACCAAGGATGTCATTGCTACTTCCAAGAACAGTAACAAGGTTTGTATCCAGGAGATAGCCCTTGTGGATGTTCCTGTTGAAGACGTTCGTATATTGTCTCTCTCAGCTGATGATTCGATTCTCGCTGCCTCCGTCGATGCTGAGATTCACTTCTTCTCTGTGGATTCACTTCTTAACAAGGATGCAAAGCCTTCTTTTTCTTATTCACCTGATGAGTCAGGCTTTGTTAAGGATTTTCGGTGGACAAGGAAAGATAAACATTCTTATCTTGTTCTTTCAAACACTGGGAAGCTCTTTCATGGAATTGATAATGCACCCCCTAAACATGTTATGGATGGTGTTGACGCCGTTGAGTGGAGTTCAAAAGGGAGTTACATTGCTGTGGCTCAAGATAATTGCCTGCGTATTTTGTCGTCAAAGTTTAACGAGAAACGTTGCATAGCACTGTCATTTGACTCATGGATTGGTGATTTTGATGAAAACTGTGTTGTGAAAGTTGATTCTATCAGATGGGTACGCCAGAACTGTATTCTTCTCGGATGCTTTCAGCTGATTGATGACATGGAAGAAAATTACCTCGTTCAGGTTATCAGGAGTCCAGACGGGAAGATTACTGATGGTTCGTCTAATCTGGTTGCTTTATCATTCTCTGATTTGTTTCCATGTTCAATGGACGATCTTGTACCGGCTGGTGTTGGACCTCATTTGCTCTTTAGCTACGTAGACCAATGCAAACTGGCGATCACAGCAAACAGGAAGAGCATTGATGAGCATATTGTTCTACTTAATTGGTCACCTGGTGATGATAAAACTGCAGTTTCCGTTGTTGATATTAACCGAGAGACCTTTTTGCCAAGGATTGGGCTCCAAGAAAATGGAGATGACAACATGATCATGGGACTCTGTATAGATATGGTTTCTGTTGAGGGGACCGTTAATGTCCGTTCCGGAGATGATGAACTGAAAGAACTCCCGCCATTTTGTGTTCTGGTGTGCCTCACTTTGGAAGGAAAGCTGGTCATGTATAATGTCGCTAGTGTTTCAGGACTCCCAGATTCATCTGATGTTGATTTGGCTTCTTCTTCTGATATAGAAGATGCTTATGCCCCTTCCATTGGAGATGATGTTCCTGGACAATTTTCGGTGGAGTCTGAACAACAACGAAAGTTTAATGTTTCGGTACAAAGTGAACAGAAACACCTCAAGTCAGAGAATTCAGTTTCTCTGTTGCATGCCGAACAAAGGTTGCCAAATGAAAAAAATTCTAAAGAGGAAACTGAGTCTTTGAAAAGTTCATTGTCTGTGGACAACAACGTGAAACAAGAACTCTATGCTGGAAAATCATTACAAGCCGCAGATGGTCAACAAAGCATAATTCCTAGGCAGTTCGGAACAAGTTTTGTGCAACCTCCTTCGTCCTTAGGATATGAAAACAACAAATTTGCAGGATTCGGTCATATCTTCCCTGTTCCTGATAAACCTCAGAAAGATACATCGGAGCAGTCTAAGTCTATGAATTTCCAGACCAGTTTTGGGCCAAAGAGTACACCAGGCTTATTTGCATTTTCCGGCCCGCAGAACGCTAGTGTTACGCCACCACAAAATACACCAGGTCAGCTATGGTCAAGTGGGAAAGGTGTCTCACCTCCAAGTTTTAGCTCCGGTTTGTTTCCACCTGTGAAAGATTCTCAGCAAAAGCAGGCTGAACAGACTGAACAGACTGGAACTGGTTATGTGAATCCTCCTACGTTCATCAAAGAGAAGCCTGTTCAAGCTATTGAGACTGCTAGAGCATCAGCGCTGAGCATTCCAACTCCTCCGCTAGGCCAAAGTCAGGACGCTGGTGAAGGAGTAGAAAAAATCGATCCCCTACCTTCTATCCGTGCCTCTCAATTGTCACTACAAGTGAAATCTTCCTTCGAAAAGTCCTCTAATCACCAGCAGCATAAAACTCCGCTCAATGCTGGACCTCTGAGGCTTGAGCCTAACATGTCAAAGCAACCCAGTAATATAAATGAGATGGCCAGAGAAATGGATGCCCTTTTACAGCCCATTGAAGGACCAGGTGGTTTCAAGGATTCTTGCACCTCATTACTTAAAAGTCATATTGAAGAATTGGAGCAAGGACTTGAAATTCTTGCTGGCAAGTGCCAAACGTGCAAGAGCATAACCCACGAACAGCAAGAAGAGATCCAACATCTTCTGGACAAAACAATTCAAGTTTTGGCAAAAAAGACATACATGGAAGGCATGTATAAGCAAACTTCTGATGACCAGTACTGGCAACTGTGGAACCACCGGAGATTGAATCCTGAGCTTGAGGCCAAACGGCAGCATATTGTGAAACTAAACAAGGATTTGACTCATCAACTGATTGAACTAGAGAGATATTTTAATCGGCTTGAACTGGATCGCTACCAAGACGATGGAGGATTTCCTCTGGCCCGAAGAGGTGTGCCAAATAGGTCTGCTCCTTCAAGACGTGTGCAATCCCTCCATAGCCTTCATAACACAATGAATTCCCAGTTGGCAGCTGCTGAGCAACTCTCTGACTGTCTCTCAAAACAAATGACCTTTTTGAAAATCGATTCACCTGTCAAAAAGAATGTAAAGCAGGAGTTGTTTGAGACAATTGGGATCCCTTATGATGCTTCATTCAACTCTCCAGATGCTGTAAAATCCAACAATGCATCTTCAGCAAAAAACATATTGCTCTCTTCGATTCCTGCAAGTATAAATGCACAGTCAAGACAACGCCATTCGTCTGGTACGAAAAGTTCTGACCCTGAAACTGCCAGGAGGAGGAGAGAATCATTAGACAGGAATTGGGCTGCTTTTGAGCCTCCAAAAACAACTGTCAAAAGGATGCTTCTCCAAGAGCGACAGAAGACGGGTACGAAACAACAGATTGTGTCGAGTGAGAGGTTACGACCTACGGAGCAATCACTGCTTCGCCTGAAGGATCATACATCACCAGTGGTCTCCTCAAATAAAGGGATAACGAAATCATTCCAACAAAACACATCTGAAGCTCAATCAACCCCGTTCAAATCAACACCAGCTATGCCACAATCTAACAGTCCCTTCACCCTCTCTCCAGTGACTGCATCAAAGCCAAGTTTCAATTGGTCTGGAAATAAATCGAACAGTGTAGCTTCTTATGCTGAGGAATCTGCCCCGTCGCAAAGTAAGGATACAAAGACACCGACTGTATTTGAACAGACAGAAAAGAAGGCTGGAGGAGTTAAACTCTCTGAAGGCAAGGCAAATATGTTTCCTGATAGAGCTGCTGGAAGTGCGCAGCGGCTTACTGGTGCACCTGCATCTAGTTTCCCTGTGCAATCACTGTTTGGTTCCAATTCCAGTAGCAGTATCTCTGGTAATAAATTAACTTTTCCTGCTGCAGCGGTATCAGTTTCATCTTCACCTTTGTCTAGCACGTCACTTGATTCCGTTTCCCCCTTACCTAAACCGTCATCACGTTCATTGCCATCCTCTACGAAAGATTCAGTTTCAGTTCCAGCATCTATTCCCATCAGCTTAGCATCAGTCCCACAAACACTTTCAGTCGCACCGACATCTACAGTTTCAGCTACGGGGCTCAGTGTTCCATTTGGTAAATCGTTGACCAGTACCAGTTTAGATCTCAGTCAAGCAGCTACGTCCGCACCTTCTCCATCACCTGGCCCTACAGCTGGTTTCTCTTTTAAGTTACCAGCTTCGTCTCCATCATCCCCTGAAATTGTCTCATCTTCAACAGGCCAATCTTCGTTTTTTCCACCATCTATTACCGCATCACCAGTGTCAACTAGTCTGGTCTCTACAGCCAGTTCCCTAACAGACAGTAATCGTTTGTTTTCATCAACCTCTTCATCTTTGACTGCCCCTATTACTTCTACCGCTCCTGGCGCGTTTAAGTTTCCTCAAGTCTCTACCCCGGCGACTGCTGTGTCCATTACAGAGTCAGTCTCAGAACCTAAAAAGTCAGAGCCTCAAAGTTCCTCAATCCTAAGTACGGCAAGTTCTGCAGATCCTGTAGCAAAGACAACAACATCACAGACTGAGCTGCTGCCGGTGAAAAGTGAAATTTCGACTTCAGAGACGACAGTAACCCCTGTCAGTTCATCTGGGTTCCTTTCTGGATTTTCATCCGCAGCACAGTCTACTCCTGTAAGTACGCCACCTCCTTCATTCAGTTGGCCCGGTAGTTCTCAGCCGCAACAGCCATCGCCAACACCTGTCTCTTTCCCTGCATCCTTTTCTACTTCCGCAAGTCCATTGAGTGAGAAAAAAGAGACTGTAGATACACAAGAAGATGAAATGGACGAAGAAGCTCCAGAGGCTAGCCAGACGACTGAACTTAGTATGAGTGGCTTTGGAGGTTTTGGGCTTGGGTCAACTCCAAACCCGTCTGCTCCCAAATCAAATCCATTTGGTGGTTCCTTTGGTAATGCTACAACAGCAACAAGTAATCCGTTCAATACGACAGTCCCCAGTGGCGAGCTGTTCCGACCTGCATCATTCAATTTTCAAAATCCTCAACCATCTCAACCGACAGGTTTTGGCGGGTTTTCTACAACCCCTTCTCAAACTCCCACTCAGGGCGGATTTGGCCAACCGGCGCAGGTTGGCGTAGGACAGCAAGCTCTAGGATCTGTACTTGGTTCATTCGGGCAGTCGAGGCAGATTGGTGCTGGTCTCCCAGGATCTACGTTTGGTTCTCCTACCGGATTTGGTGGGTCTAACCCAGGAAGCGGCCTCCCAAATGCACCAGCATCTGGTGGTTTTGCAGCTGCTGGCTCCAGTGCCACTGGTGGGTTTGCAGCCATGGCTTCAGCTGGTAGGGGATTCGTAGGTGCTTCTTCTAGTCCAACAGGTGGATTTGGTGGACTTGGTTCAGGAGGCGGTGGATTTGGTGGACTTGGTTCAGGATCCGGAGGGGGTGGATTTGGTGGACTTGGTTCAGGATCCGGAGGCGGTGGTGGATTTGGTGGACTTGGTTCAGGATCCGGAGGCGGTGGTGGATTTGGTGGACTTGGTTCAGGCTCGGGAGGGTTTGGAAGCTTTGCTCCTCCTAATAGTGGAGGTTTTGCGGGAGCATCAGGAGGTGGTGGTTTTGGGGGTTTCGCTGGCCAAGGACAAGGGCAAGGGCAAAGCGGTGGTGGTGGGTTCTCAGGCTTTGGTGGCAACACGGGAGGAGCAGGAAAGCCATCGGAACTCTTCACACAGATGAGAAAATGA
Protein:  
MGKLEITEEVEGDRVGTTDYYFDRIGEPIRIKEDDAQYDLDSPPSQPLAISERRGLVFIAHSSGFLVGRTKDVIATSKNSNKVCIQEIALVDVPVEDVRILSLSADDSILAASVDAEIHFFSVDSLLNKDAKPSFSYSPDESGFVKDFRWTRKDKHSYLVLSNTGKLFHGIDNAPPKHVMDGVDAVEWSSKGSYIAVAQDNCLRILSSKFNEKRCIALSFDSWIGDFDENCVVKVDSIRWVRQNCILLGCFQLIDDMEENYLVQVIRSPDGKITDGSSNLVALSFSDLFPCSMDDLVPAGVGPHLLFSYVDQCKLAITANRKSIDEHIVLLNWSPGDDKTAVSVVDINRETFLPRIGLQENGDDNMIMGLCIDMVSVEGTVNVRSGDDELKELPPFCVLVCLTLEGKLVMYNVASVSGLPDSSDVDLASSSDIEDAYAPSIGDDVPGQFSVESEQQRKFNVSVQSEQKHLKSENSVSLLHAEQRLPNEKNSKEETESLKSSLSVDNNVKQELYAGKSLQAADGQQSIIPRQFGTSFVQPPSSLGYENNKFAGFGHIFPVPDKPQKDTSEQSKSMNFQTSFGPKSTPGLFAFSGPQNASVTPPQNTPGQLWSSGKGVSPPSFSSGLFPPVKDSQQKQAEQTEQTGTGYVNPPTFIKEKPVQAIETARASALSIPTPPLGQSQDAGEGVEKIDPLPSIRASQLSLQVKSSFEKSSNHQQHKTPLNAGPLRLEPNMSKQPSNINEMAREMDALLQPIEGPGGFKDSCTSLLKSHIEELEQGLEILAGKCQTCKSITHEQQEEIQHLLDKTIQVLAKKTYMEGMYKQTSDDQYWQLWNHRRLNPELEAKRQHIVKLNKDLTHQLIELERYFNRLELDRYQDDGGFPLARRGVPNRSAPSRRVQSLHSLHNTMNSQLAAAEQLSDCLSKQMTFLKIDSPVKKNVKQELFETIGIPYDASFNSPDAVKSNNASSAKNILLSSIPASINAQSRQRHSSGTKSSDPETARRRRESLDRNWAAFEPPKTTVKRMLLQERQKTGTKQQIVSSERLRPTEQSLLRLKDHTSPVVSSNKGITKSFQQNTSEAQSTPFKSTPAMPQSNSPFTLSPVTASKPSFNWSGNKSNSVASYAEESAPSQSKDTKTPTVFEQTEKKAGGVKLSEGKANMFPDRAAGSAQRLTGAPASSFPVQSLFGSNSSSSISGNKLTFPAAAVSVSSSPLSSTSLDSVSPLPKPSSRSLPSSTKDSVSVPASIPISLASVPQTLSVAPTSTVSATGLSVPFGKSLTSTSLDLSQAATSAPSPSPGPTAGFSFKLPASSPSSPEIVSSSTGQSSFFPPSITASPVSTSLVSTASSLTDSNRLFSSTSSSLTAPITSTAPGAFKFPQVSTPATAVSITESVSEPKKSEPQSSSILSTASSADPVAKTTTSQTELLPVKSEISTSETTVTPVSSSGFLSGFSSAAQSTPVSTPPPSFSWPGSSQPQQPSPTPVSFPASFSTSASPLSEKKETVDTQEDEMDEEAPEASQTTELSMSGFGGFGLGSTPNPSAPKSNPFGGSFGNATTATSNPFNTTVPSGELFRPASFNFQNPQPSQPTGFGGFSTTPSQTPTQGGFGQPAQVGVGQQALGSVLGSFGQSRQIGAGLPGSTFGSPTGFGGSNPGSGLPNAPASGGFAAAGSSATGGFAAMASAGRGFVGASSSPTGGFGGLGSGGGGFGGLGSGSGGGGFGGLGSGSGGGGGFGGLGSGSGGGGGFGGLGSGSGGFGSFAPPNSGGFAGASGGGGFGGFAGQGQGQGQSGGGGFSGFGGNTGGAGKPSELFTQMRK